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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933314.1_cds_XP_016479687.1_71204
CDS Infomation

[gene=LOC107800931] [db_xref=GeneID:107800931] [protein=chorismate mutase 1, chloroplastic-like] [protein_id=XP_016479687.1] [location=complement(join(3734..3970,4085..4177,5253..5396,5802..5888,5964..6186,8219..8391))] [gbkey=CDS]
Sequence

ATGGAAGCCCAATTGTTAAAACTCCCTTCTCCTTCCTTAACAAGTACCAATTCTTCAAAA
CACAGTACCCTTTTACCCCGTCAAAAATGGTCAAATTTTTGTAAGTTTCAATTACCCAAT
TCAACTAGTACCATTACTATTCGTCCCCTTCAAGCTTCTGCTACTTCTCTTGGACTTGGG
CCAAAGAAGAGAATAGATGAGACGGAGAGTTACACTCTTGATGGTATAAGGAACTCTTTA
ATTCGACAAGAAGATAGCATAATATTCAGCCTTGTGGAGAGAGCTCAGTACTGTTACAAT
GCGGAGACATATGATCCTGATGTTTTTTTGATGGATGGGTTTCATGGCTCTTTGGTTGAA
TATATTGTCAAAGAAACTGAAAAGCTTCATGCTAAGGTTGGAAGATATAAAAGCCCTGAT
GAGCACCCATTCTTCCCAAAAGAATTACCCGAGCCAATGTTGCCACCCATGCAGTTCCCA
AAGGTTCTGCATTCAGTTGCTGATTCAATAAATATCAATGTCAAAATATGGGAAATGTAT
TTCAAGAATCTCCTCCCAAGATTAGTAAAGGAAGGCGACGATGGTAATTTTGGATCTACA
GCAGTTTGTGACACTATTTGCTTGCAGGCCCTGTCGAAGAGAATTCATTATGGGAAATTT
GTCGCTGAAGCAAAATTTCGAGCCTCACCAGATGTCTATAAGGCTGCCATAAGAGCACAA
GACAGAAACGGACTGATGGATTTGTTAACCTACCCTACTGTTGAAGAGGCTATCACGAGG
AGGGTAGAAATGAAAACCAGAACTTACGGACAAGAATTTAACATCAATGGACCGGAAAAT
GGAGGTGACCCAGTGTACAAAATAAAACCAAGCCTAGTTGCTGAATTGTACGGCGACTGG
ATCATGCCATTGACAAAGGAAGTTCAAGTTGAGTATCTCCTGAGAAGACTGGATTAG

Peptide Sequence

PEP ID

XP_016479687.1
PEP Infomation

PREDICTED: chorismate mutase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MEAQLLKLPSPSLTSTNSSKHSTLLPRQKWSNFCKFQLPNSTSTITIRPLQASATSLGLG
PKKRIDETESYTLDGIRNSLIRQEDSIIFSLVERAQYCYNAETYDPDVFLMDGFHGSLVE
YIVKETEKLHAKVGRYKSPDEHPFFPKELPEPMLPPMQFPKVLHSVADSININVKIWEMY
FKNLLPRLVKEGDDGNFGSTAVCDTICLQALSKRIHYGKFVAEAKFRASPDVYKAAIRAQ
DRNGLMDLLTYPTVEEAITRRVEMKTRTYGQEFNINGPENGGDPVYKIKPSLVAELYGDW
IMPLTKEVQVEYLLRRLD

Transcript Sequence

Gene sequence data has not been registered.